Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6877827

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:8,627

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 191 SVs from 34 studies. See in: genome view

Submitted genomic142,327,318-142,335,944

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6877827	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000008.11	Chr8	142,327,318	142,335,944
nsv6877827	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	143,408,679	143,417,305

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18551759	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18551759	Submitted genomic		NC_000008.11:g.142 327318_142335944de l	GRCh38 (hg38)		NC_000008.11	Chr8	142,327,318	142,335,944
nssv18551759	Remapped	Perfect	NC_000008.10:g.143 408679_143417305de l	GRCh37.p13	First Pass	NC_000008.10	Chr8	143,408,679	143,417,305

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18551759	4.6e-05	13	276106

You are here: NCBI