Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6832675

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:5,984

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 117 SVs from 27 studies. See in: genome view

Submitted genomic140,105,073-140,111,056

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6832675	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000007.14	Chr7	140,105,073	140,111,056
nsv6832675	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	139,804,873	139,810,856

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18535762	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18535762	Submitted genomic		NC_000007.14:g.140 105073_140111056de l	GRCh38 (hg38)		NC_000007.14	Chr7	140,105,073	140,111,056
nssv18535762	Remapped	Perfect	NC_000007.13:g.139 804873_139810856de l	GRCh37.p13	First Pass	NC_000007.13	Chr7	139,804,873	139,810,856

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18535762	7e-06	2	276170

You are here: NCBI