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dbVar

Database of genomic structural variation

nsv6804990

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:6,071

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 168 SVs from 33 studies. See in: genome view

Submitted genomic16,225,591-16,231,661

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6804990	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000007.14	Chr7	16,225,591	16,231,661
nsv6804990	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	16,265,216	16,271,286

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18537850	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18537850	Submitted genomic		NC_000007.14:g.162 25591_16231661del	GRCh38 (hg38)		NC_000007.14	Chr7	16,225,591	16,231,661
nssv18537850	Remapped	Perfect	NC_000007.13:g.162 65216_16271286del	GRCh37.p13	First Pass	NC_000007.13	Chr7	16,265,216	16,271,286

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18537850	6.1e-05	17	272170

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