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nsv6787375

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:1,512

    Links to Other Resources

    Source: NCBI

    Genome View

    Select assembly:
    Overlapping variant regions from other studies: 143 SVs from 37 studies. See in: genome view    
    Submitted genomic141,150,268-141,151,779Question Mark
    Overlapping variant regions from other studies: 142 SVs from 37 studies. See in: genome view    
    Remapped(Score: Perfect):140,529,849-140,531,360Question Mark
    Overlapping variant regions from other studies: 29 SVs from 16 studies. See in: genome view    
    Remapped(Score: Perfect):385,444-386,955Question Mark

    Variant Region Placement Information

    Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
    nsv6787375Submitted genomicGRCh38 (hg38)Primary AssemblyNC_000005.10Chr5141,150,268141,151,779
    nsv6787375RemappedPerfectGRCh37.p13Primary AssemblySecond PassNC_000005.9Chr5140,529,849140,531,360
    nsv6787375RemappedPerfectGRCh37.p13PATCHESFirst PassNW_004775428.1Chr5|NW_00
    4775428.1
    385,444386,955

    Variant Call Information

    Variant Call IDTypeMethodAnalysis
    nssv18509102deletionSequencingSplit read and paired-end mapping

    Variant Call Placement Information

    Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrStartStop
    nssv18509102Submitted genomicNC_000005.10:g.141
    150268_141151779de
    l
    GRCh38 (hg38)NC_000005.10Chr5141,150,268141,151,779
    nssv18509102RemappedPerfectNW_004775428.1:g.3
    85444_386955del
    GRCh37.p13First PassNW_004775428.1Chr5|NW_00
    4775428.1
    385,444386,955
    nssv18509102RemappedPerfectNC_000005.9:g.1405
    29849_140531360del
    GRCh37.p13Second PassNC_000005.9Chr5140,529,849140,531,360

    No validation data were submitted for this variant

    No clinical assertion data were submitted for this variant

    Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

    Genotype Information

    Variant Call IDAllele Frequency (AF)Allele Count (AC)Allele Number (AN)
    nssv185091021.1e-053272890
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