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dbVar

Database of genomic structural variation

nsv6773242

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,779

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 99 SVs from 23 studies. See in: genome view

Submitted genomic31,220,760-31,224,538

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6773242	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	31,220,760	31,224,538
nsv6773242	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	31,220,867	31,224,645

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18513949	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18513949	Submitted genomic		NC_000005.10:g.312 20760_31224538del	GRCh38 (hg38)		NC_000005.10	Chr5	31,220,760	31,224,538
nssv18513949	Remapped	Perfect	NC_000005.9:g.3122 0867_31224645del	GRCh37.p13	First Pass	NC_000005.9	Chr5	31,220,867	31,224,645

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18513949	1.1e-05	3	276058

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