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dbVar

Database of genomic structural variation

nsv6770884

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:129,253

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 480 SVs from 61 studies. See in: genome view

Submitted genomic86,175,465-86,304,717

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6770884	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	86,175,465	86,304,717
nsv6770884	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	85,471,283	85,600,535

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18518542	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18518542	Submitted genomic		NC_000005.10:g.861 75465_86304717del	GRCh38 (hg38)		NC_000005.10	Chr5	86,175,465	86,304,717
nssv18518542	Remapped	Perfect	NC_000005.9:g.8547 1283_85600535del	GRCh37.p13	First Pass	NC_000005.9	Chr5	85,471,283	85,600,535

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18518542	4e-06	1	276052

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