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dbVar

Database of genomic structural variation

nsv6628610

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:62,069

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 319 SVs from 56 studies. See in: genome view

Remapped(Score: Perfect):99,231,427-99,293,495

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6628610	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	99,231,427	99,293,495
nsv6628610	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	99,847,890	99,909,958

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282189	duplication	OSC2225	SNP array	Probe signal intensity	nssv18282810, nssv18282811
nssv18284704	duplication	OSC0257	SNP array	Probe signal intensity	7
nssv18285165	duplication	OSC2568	SNP array	Probe signal intensity	8
nssv18288353	duplication	OSC3334	SNP array	Probe signal intensity	6
nssv18295354	duplication	OSC4558	SNP array	Probe signal intensity	8

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282189	Remapped	Perfect	NC_000002.12:g.(?_ 99231427)_(9929349 5_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	99,231,427	99,293,495
nssv18284704	Remapped	Perfect	NC_000002.12:g.(?_ 99231427)_(9929349 5_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	99,231,427	99,293,495
nssv18285165	Remapped	Perfect	NC_000002.12:g.(?_ 99231427)_(9929349 5_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	99,231,427	99,293,495
nssv18288353	Remapped	Perfect	NC_000002.12:g.(?_ 99231427)_(9929349 5_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	99,231,427	99,293,495
nssv18295354	Remapped	Perfect	NC_000002.12:g.(?_ 99231427)_(9929349 5_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	99,231,427	99,293,495
nssv18282189	Submitted genomic		NC_000002.11:g.(?_ 99847890)_(9990995 8_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	99,847,890	99,909,958
nssv18284704	Submitted genomic		NC_000002.11:g.(?_ 99847890)_(9990995 8_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	99,847,890	99,909,958
nssv18285165	Submitted genomic		NC_000002.11:g.(?_ 99847890)_(9990995 8_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	99,847,890	99,909,958
nssv18288353	Submitted genomic		NC_000002.11:g.(?_ 99847890)_(9990995 8_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	99,847,890	99,909,958
nssv18295354	Submitted genomic		NC_000002.11:g.(?_ 99847890)_(9990995 8_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	99,847,890	99,909,958

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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