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dbVar

Database of genomic structural variation

nsv6624618

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:7
Validation:Not tested
Clinical Assertions: No
Region Size:17,492

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 480 SVs from 47 studies. See in: genome view

Remapped(Score: Perfect):76,720,436-76,737,927

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6624618	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000018.10	Chr18	76,720,436	76,737,927
nsv6624618	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000018.9	Chr18	74,432,392	74,449,883

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18283853	duplication	OSC2314	SNP array	Probe signal intensity	7
nssv18285129	duplication	OSC2547	SNP array	Probe signal intensity	9
nssv18286274	duplication	OSC2708	SNP array	Probe signal intensity	5
nssv18287389	duplication	OSC3083	SNP array	Probe signal intensity	11
nssv18292269	duplication	OSC3919	SNP array	Probe signal intensity	nssv18291680, nssv18291920, nssv18292268
nssv18295998	duplication	OSC0476	SNP array	Probe signal intensity	5
nssv18317442	duplication	OSC0885	SNP array	Probe signal intensity	6

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18283853	Remapped	Perfect	NC_000018.10:g.(?_ 76720436)_(7673792 7_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	76,720,436	76,737,927
nssv18285129	Remapped	Perfect	NC_000018.10:g.(?_ 76720436)_(7673792 7_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	76,720,436	76,737,927
nssv18286274	Remapped	Perfect	NC_000018.10:g.(?_ 76720436)_(7673792 7_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	76,720,436	76,737,927
nssv18287389	Remapped	Perfect	NC_000018.10:g.(?_ 76720436)_(7673792 7_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	76,720,436	76,737,927
nssv18292269	Remapped	Perfect	NC_000018.10:g.(?_ 76720436)_(7673792 7_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	76,720,436	76,737,927
nssv18295998	Remapped	Perfect	NC_000018.10:g.(?_ 76720436)_(7673792 7_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	76,720,436	76,737,927
nssv18317442	Remapped	Perfect	NC_000018.10:g.(?_ 76720436)_(7673792 7_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	76,720,436	76,737,927
nssv18283853	Submitted genomic		NC_000018.9:g.(?_7 4432392)_(74449883 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	74,432,392	74,449,883
nssv18285129	Submitted genomic		NC_000018.9:g.(?_7 4432392)_(74449883 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	74,432,392	74,449,883
nssv18286274	Submitted genomic		NC_000018.9:g.(?_7 4432392)_(74449883 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	74,432,392	74,449,883
nssv18287389	Submitted genomic		NC_000018.9:g.(?_7 4432392)_(74449883 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	74,432,392	74,449,883
nssv18292269	Submitted genomic		NC_000018.9:g.(?_7 4432392)_(74449883 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	74,432,392	74,449,883
nssv18295998	Submitted genomic		NC_000018.9:g.(?_7 4432392)_(74449883 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	74,432,392	74,449,883
nssv18317442	Submitted genomic		NC_000018.9:g.(?_7 4432392)_(74449883 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	74,432,392	74,449,883

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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