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dbVar

Database of genomic structural variation

nsv6620568

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:1,581,215

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 7049 SVs from 128 studies. See in: genome view

Remapped(Score: Pass):46,157,935-47,739,149

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6620568	Remapped	Pass	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	46,157,935	47,739,149
nsv6620568	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	47,109,571	47,703,946

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18292268	duplication	OSC3919	SNP array	Probe signal intensity	nssv18291920, nssv18291680, nssv18292269
nssv18292988	duplication	OSC4175	SNP array	Probe signal intensity	6
nssv18294016	duplication	OSC0441	SNP array	Probe signal intensity	5
nssv18300862	duplication	OSC5480	SNP array	Probe signal intensity	10

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18292268	Remapped	Pass	NC_000010.11:g.(?_ 46157935)_(4773914 9_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	46,157,935	47,739,149
nssv18292988	Remapped	Pass	NC_000010.11:g.(?_ 46157935)_(4773914 9_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	46,157,935	47,739,149
nssv18294016	Remapped	Pass	NC_000010.11:g.(?_ 46157935)_(4773914 9_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	46,157,935	47,739,149
nssv18300862	Remapped	Pass	NC_000010.11:g.(?_ 46157935)_(4773914 9_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	46,157,935	47,739,149
nssv18292268	Submitted genomic		NC_000010.10:g.(?_ 47109571)_(4770394 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	47,109,571	47,703,946
nssv18292988	Submitted genomic		NC_000010.10:g.(?_ 47109571)_(4770394 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	47,109,571	47,703,946
nssv18294016	Submitted genomic		NC_000010.10:g.(?_ 47109571)_(4770394 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	47,109,571	47,703,946
nssv18300862	Submitted genomic		NC_000010.10:g.(?_ 47109571)_(4770394 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	47,109,571	47,703,946

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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