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dbVar

Database of genomic structural variation

nsv6275023

Organism: Homo sapiens

Study:nstd214 (Naslavsky et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:82

Publication(s):Naslavsky et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 174 SVs from 27 studies. See in: genome view

Submitted genomic89,934,127-89,934,208

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6275023	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000016.10	Chr16	89,934,127	89,934,208
nsv6275023	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	90,000,535	90,000,616

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17935659	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17935659	Submitted genomic		NC_000016.10:g.899 34127_89934208del	GRCh38 (hg38)		NC_000016.10	Chr16	89,934,127	89,934,208
nssv17935659	Remapped	Perfect	NC_000016.9:g.9000 0535_90000616del	GRCh37.p13	First Pass	NC_000016.9	Chr16	90,000,535	90,000,616

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17935659	0.009	19	2226

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