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dbVar

Database of genomic structural variation

nsv5984125

Organism: Homo sapiens

Study:nstd212 (Wu et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:6,396

Publication(s):Wu et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 162 SVs from 35 studies. See in: genome view

Submitted genomic40,511,005-40,517,400

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5984125	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	40,511,005	40,517,400
nsv5984125	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	40,976,677	40,983,072

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17518048	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17518048	Submitted genomic		NC_000001.11:g.405 11005_40517400del	GRCh38 (hg38)		NC_000001.11	Chr1	40,511,005	40,517,400
nssv17518048	Remapped	Perfect	NC_000001.10:g.409 76677_40983072del	GRCh37.p13	First Pass	NC_000001.10	Chr1	40,976,677	40,983,072

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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