4FM9,3L4J


Conserved Protein Domain Family
TOPRIM_C

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pfam16898: TOPRIM_C 
C-terminal associated domain of TOPRIM
TOPRIM_C is found as the C-terminal extension of the TOPRIM domain, pfam01751 in metazoa.
Statistics
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PSSM-Id: 465302
Aligned: 146 rows
Threshold Bit Score: 106.836
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4FM9_A        143 FITPIVKVSk----nK-QEMAFYSLPEF------EEWKSST---PNH-K--------KWKVKYYKGLGTSTSKEAKEYFA 199 
XP_002292612  577 FITPLLKATkkgkkkD--SISFFSVAEY------NSWRESLedeDEI-S--------KWTVKYYKGLGTSTPTEAKDYFL 639 
EEC47148      571 FVTPLLKASkkssktG--TLSFYSMAEY------KKWRGSIe-aEDF-K--------KWTVKYYKGLGTSTPAEAREYFS 632 
1_pfamImport    1 FRTPLLKAQrg-----eDVKSFFSITEY------QKWAETV---ENL-E--------KWKIKYYKGLGTSTSNEARQYFR 57  
CAP35657      592 FRTPLLKAKkg-----nEVVPFFSLNEY------RKWAETI---E---G--------KWKVKYYKGLGTSTSNEAREYFR 646 
NP_001293652  592 FRTPLLKAKkg-----dKVRSFFSMNEY------RKWADV----EEG-G--------KWKIKYYKGLGTSTSNEAREYFS 647 
Q9SKH1         45 LVTPYVKVS----------RLTFSSHKYfivltnLSYVTSTlntRNG-KmkdrnylnRWTIKFYKGVWVQVMRE-KNVLS 112  thale cress
XP_002869658  524 FITPLVKATqhgthrI---ERIYSNPAY------NNWSKTI----EH-D--------KWSIDYYKGLGTCTYEEACEYLA 581 
XP_018514806   37 FVTPLIKVThetkeaE----TFSSLREF------KEWKEKD---KAHaT--------EWSVKFYKGLGSSTFEEGILYFN 95  
EFX84376      145 FVIPIVKATkgigelAeS-LTFYSLDEF------EQWKTQT---ENW-R--------HYHIKHYKGLETLRKEEVKECFS 205 
4FM9_A        200 DMKRHRIQFKYSGP-EDD--AAISLAFSKKQIDDRKEW-LTNFMedrrqrkllglP-----------ED-YL--YgQTT- 260 
XP_002292612  640 SFVRHYRPFKWQSEkNDG--ERIDMAFEKDRANDRKDWiLTEYD-----------E-----------KS-AVtvDeRDG- 693 
EEC47148      633 AFNDHFRPFLWNSD-IDG--ELLDMVFDGERAADRRAWiLDVYD-----------E-----------TS-NLlnDpSAG- 685 
1_pfamImport   58 DFGKHVVNFQYKDA-SDD--EAIRMAFDREKTEERKSW-IQSLG-----------Tl-----------------NgSNEl 105 
CAP35657      647 NLDHHTVNFNYAGS-SDD--DAIRMAFDREKSDERKRW-IRGSD-----------Evstt-------------------e 692 
NP_001293652  648 DLDHHTVNFKYTGT-TDD--DAIRMAFDRDKSDERKEW-IRRSE-----------Neitn-------------------e 693 
Q9SKH1        113 NVDQNKRFFIW----DEGseAALENAFGTSE-DKQKKW-IEKYV-----------P-----------GT-FL--DsKKQ- 160  thale cress
XP_002869658  582 HIDNHTKEFFWAGD-NDG--RSIDVAFKTEDIAAKKIW-LEEMP-----------K---------------VyiGrLNR- 630 
XP_018514806   96 HIDIHVREFVWEGD-ADG--EAINIAFGGD-PEKRKEW-IRKYN-----------Qvdsl---hgprGN----------- 145 
EFX84376      206 NLQRHQIDFRHGGD-DDD--RAISMAFNNKHLEEWRYR-LNVWK-----------NackdlrqlgfsGDlYA----KDI- 265 
4FM9_A        261 ---T-YLTYNDFINKELILFSNSDN 281 
XP_002292612  694 ---N-SITYGDFVDNELIHFSNANN 714 
EEC47148      686 ---N-NVSYEDFINKEMIHFSNADN 706 
1_pfamImport  106 aeeKqQMSYKEFVDGELMQFGMADL 130 
CAP35657      693 dveKtELNYEEFVNSQLMQFGMADL 717 
NP_001293652  694 ddgKtEISYQEFVDGQLMQFGMVDL 718 
Q9SKH1        161 -----QIMYSDFVTKKLKLYFTTSN 180  thale cress
XP_002869658  631 -----RMSYGSFINEELIFAAQAIL 650 
XP_018514806  146 -----KITYKEFVNNELVLFTIANL 165 
EFX84376      266 ---K-EVSYHDFVKKDLIRFRNMEY 286 
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