3L4J: Topoisomerase II-DNA cleavage complex, apo

PDB ID: 3L4JDownload
MMDB ID: 178095
PDB Deposition Date: 2009/12/20
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 2.48  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3L4J: pentameric; determined by author
Molecular Components in 3L4J
Label Count Molecule
Protein (1 molecule)
1
DNA Topoisomerase 2
Molecule annotation
Nucleotides(4 molecules)
1
DNA (5'-d(p*cp*cp*tp*ap*cp*tp*gp*cp*tp*ap*c)-3')
Molecule annotation
1
DNA (5'-d(*cp*gp*cp*gp*gp*tp*ap*gp*cp*ap*gp*tp*ap*gp*g)-3')
Molecule annotation
1
DNA (5'-d(p*gp*gp*ap*tp*gp*ap*cp*gp*ap*tp*)-3')
Molecule annotation
1
DNA (5'-d(*cp*gp*cp*gp*ap*ap*tp*cp*gp*tp*cp*ap*tp*cp*c)-3')
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
3'-THIO-THYMIDINE-5'-PHOSPHATE3'-THIO-THYMIDINE-5'-PHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303