Escherichia coli SMG012F6, isolated from rectal sw... - BioSample

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Identifiers: BioSample: SAMN26234274; Sample name: SMG012F6; SRA: SRS12547535

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Attributes

strain	SMG012F6
collected by	Universidade Federal de Sao Paulo
collection date	2019-10
geographic location	Brazil: Sao Paulo
host	Homo sapiens
host disease	Urinary tract infection
isolation source	rectal swab
latitude and longitude	22.36448060 S 46.94347391 W
host age	48
host sex	female
pathotype	ExPEC
serotype	O17/O44/O77:H18

Description: This strain is part of a comparative study evaluating E. coli clones isolated from the gut of hospitalized patients with strains causing urinary tract infection in one single center. The Escherichia coli strain SMG012F6 was isolated from a rectal swab from an inpatient with urinary tract infection. This sequence refers to clone F6 from the patient SMG012. The other clones isolated from the rectal swab of the same inpatient are SMG012F1 and SMG012F3. This strain is a clone of the strain isolated from the urine of the patient.