ID 1187983 - BioProject

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Accession: PRJEB82470 ID: 1187983

Metagenome assembly of PRJNA761967 data set (chicken gut microbiome/resistome)

The Third Party Annotation (TPA) assembly was derived from the primary data set PRJNA761967

Accession	PRJEB82470
Data Type	Genome sequencing
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Richardson L et al., "MGnify: the microbiome sequence data analysis resource in 2023.", Nucleic Acids Res, 2023 Jan 6;51(D1):D753-D759
Submission	Registration date: 19-Nov-2024 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	10076
WGS master	70
Publications
PubMed	1
PMC	1
Other datasets
BioSample	70
Assembly	70

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

70
70

Assembly	WGS	BioSample	Taxonomy
GCA_964381195.1	CAYKWY000000000	SAMEA117401732	Bifidobacterium animalis
GCA_964381175.1	CAYKZJ000000000	SAMEA117401742	Candidatus Agathobaculum intestinigallinarum
GCA_964380975.1	CAYKYY000000000	SAMEA117401728	Candidatus Agathobaculum merdipullorum
GCA_964380565.1	CAYKWQ000000000	SAMEA117401761	Candidatus Anaerobutyricum stercoripullorum
GCA_964380825.1	CAYKYR000000000	SAMEA117401781	Candidatus Blautia avicola
GCA_964381455.1	CAYKZR000000000	SAMEA117401755	Candidatus Blautia excrementigallinarum
GCA_964381395.1	CAYKZO000000000	SAMEA117401720	Candidatus Blautia merdavium
GCA_964380795.1	CAYKWK000000000	SAMEA117401764	Candidatus Borkfalkia faecavium
GCA_964380545.1	CAYKVY000000000	SAMEA117401768	Candidatus Borkfalkia faecigallinarum
GCA_964381365.1	CAYKXO000000000	SAMEA117401715	Candidatus Caccovivens faecavium
GCA_964381205.1	CAYKYC000000000	SAMEA117401746	Candidatus Coproplasma stercoripullorum
GCA_964380475.1	CAYKWG000000000	SAMEA117401757	Candidatus Eisenbergiella merdigallinarum
GCA_964380755.1	CAYKWS000000000	SAMEA117401718	Candidatus Faecousia excrementipullorum
GCA_964381225.1	CAYKZL000000000	SAMEA117401737	Candidatus Fusicatenibacter intestinigallinarum
GCA_964380865.1	CAYKWH000000000	SAMEA117401770	Candidatus Gallimonas gallistercoris
GCA_964381085.1	CAYKXS000000000	SAMEA117401744	Candidatus Gallimonas gallistercoris
GCA_964381045.1	CAYKWX000000000	SAMEA117401776	Candidatus Gemmiger excrementipullorum
GCA_964380645.1	CAYKWN000000000	SAMEA117401771	Candidatus Gemmiger stercoripullorum
GCA_964380855.1	CAYKXW000000000	SAMEA117401762	Candidatus Heritagella intestinalis
GCA_964380935.1	CAYKXM000000000	SAMEA117401712	Candidatus Mediterraneibacter faecipullorum
GCA_964381345.1	CAYKYF000000000	SAMEA117401719	Candidatus Mediterraneibacter gallistercoris
GCA_964380735.1	CAYKXE000000000	SAMEA117401773	Candidatus Mediterraneibacter surreyensis
GCA_964381145.1	CAYKZE000000000	SAMEA117401748	Candidatus Ornithomonoglobus merdipullorum
GCA_964381245.1	CAYKYZ000000000	SAMEA117401739	Candidatus Ornithomonoglobus merdipullorum
GCA_964380625.1	CAYKXY000000000	SAMEA117401725	Escherichia coli
GCA_964380845.1	CAYKWU000000000	SAMEA117401730	Faecalibacterium gallinarum
GCA_964380465.1	CAYKWA000000000	SAMEA117401775	Ligilactobacillus salivarius
GCA_964380585.1	CAYKVZ000000000	SAMEA117401780	Limosilactobacillus reuteri
GCA_964380505.1	CAYKWD000000000	SAMEA117401750	uncultured Agathobaculum sp.
GCA_964381255.1	CAYKXA000000000	SAMEA117401738	uncultured Bacilli bacterium
GCA_964380905.1	CAYKYL000000000	SAMEA117401779	uncultured Blautia sp.
GCA_964381485.1	CAYKZU000000000	SAMEA117401766	uncultured Blautia sp.
GCA_964380595.1	CAYKYD000000000	SAMEA117401727	uncultured Blautia sp.
GCA_964380365.1	CAYKVM000000000	SAMEA117401734	uncultured Blautia sp.
GCA_964380955.1	CAYKYQ000000000	SAMEA117401754	uncultured Clostridia bacterium
GCA_964380705.1	CAYKXU000000000	SAMEA117401753	uncultured Clostridia bacterium
GCA_964380915.1	CAYKXK000000000	SAMEA117401723	uncultured Clostridia bacterium
GCA_964381275.1	CAYKZK000000000	SAMEA117401745	uncultured Clostridia bacterium
GCA_964381435.1	CAYKXT000000000	SAMEA117401716	uncultured Clostridia bacterium
GCA_964380525.1	CAYKVX000000000	SAMEA117401759	uncultured Clostridia bacterium
GCA_964380385.1	CAYKVO000000000	SAMEA117401758	uncultured Clostridia bacterium
GCA_964380515.1	CAYKWL000000000	SAMEA117401767	uncultured Clostridia bacterium
GCA_964381305.1	CAYKYN000000000	SAMEA117401729	uncultured Clostridia bacterium
GCA_964380695.1	CAYKXQ000000000	SAMEA117401724	uncultured Clostridia bacterium
GCA_964381375.1	CAYKYO000000000	SAMEA117401717	uncultured Clostridia bacterium
GCA_964380495.1	CAYKVW000000000	SAMEA117401749	uncultured Clostridia bacterium
GCA_964381325.1	CAYKYI000000000	SAMEA117401713	uncultured Clostridia bacterium
GCA_964380835.1	CAYKWI000000000	SAMEA117401777	uncultured Clostridia bacterium
GCA_964380805.1	CAYKZD000000000	SAMEA117401721	uncultured Clostridia bacterium
GCA_964380435.1	CAYKWF000000000	SAMEA117401733	uncultured Clostridia bacterium
GCA_964380575.1	CAYKVS000000000	SAMEA117401765	uncultured Clostridia bacterium
GCA_964381005.1	CAYKYB000000000	SAMEA117401774	uncultured Eisenbergiella sp.
GCA_964380945.1	CAYKXL000000000	SAMEA117401714	uncultured Eisenbergiella sp.
GCA_964380965.1	CAYKYA000000000	SAMEA117401778	uncultured Erysipelotrichaceae bacterium
GCA_964380455.1	CAYKWR000000000	SAMEA117401763	uncultured Eubacteriales bacterium
GCA_964381295.1	CAYKXJ000000000	SAMEA117401735	uncultured Eubacteriales bacterium
GCA_964381405.1	CAYKZB000000000	SAMEA117401722	uncultured Eubacterium sp.
GCA_964380745.1	CAYKXP000000000	SAMEA117401740	uncultured Fusicatenibacter sp.
GCA_964381125.1	CAYKZC000000000	SAMEA117401736	uncultured Gemmiger sp.
GCA_964380535.1	CAYKVU000000000	SAMEA117401769	uncultured Lachnospiraceae bacterium
GCA_964381445.1	CAYKZQ000000000	SAMEA117401726	uncultured Lachnospiraceae bacterium
GCA_964380485.1	CAYKVQ000000000	SAMEA117401751	uncultured Lachnospiraceae bacterium
GCA_964381185.1	CAYKWW000000000	SAMEA117401731	uncultured Lachnospiraceae bacterium
GCA_964381285.1	CAYKYP000000000	SAMEA117401747	uncultured Lachnospiraceae bacterium
GCA_964380675.1	CAYKXZ000000000	SAMEA117401756	uncultured Merdibacter sp.
GCA_964381065.1	CAYKXF000000000	SAMEA117401741	uncultured Oscillospiraceae bacterium
GCA_964380655.1	CAYKWE000000000	SAMEA117401752	uncultured Oscillospiraceae bacterium
GCA_964380555.1	CAYKXC000000000	SAMEA117401772	uncultured Oscillospiraceae bacterium
GCA_964381425.1	CAYKZH000000000	SAMEA117401743	uncultured Oscillospiraceae bacterium
GCA_964380895.1	CAYKZA000000000	SAMEA117401760	uncultured Oscillospiraceae bacterium

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Metagenome assembly of PRJNA761967 data set (chicken gut microbiome/resistome)

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