ID 901822 - BioProject

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Accession: PRJEB57339 ID: 901822

EMG produced TPA metagenomics assembly of PRJNA762218 data set (Salivary Microbiome in Adenoid Cystic Carcinoma).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA762218, and was assembled with metaSPAdes v3. More...

Accession	PRJEB57339
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 15-Nov-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	14545
WGS master	176
Publications
PubMed	1
PMC	1
Other datasets
BioSample	176
Assembly	176

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

176
176

Assembly	WGS	BioSample	Taxonomy
GCA_963537945.1	CAUTHE000000000	SAMEA114447314	Actinomyces dentalis
GCA_963535065.1	CAUSVB000000000	SAMEA114447312	Actinomyces graevenitzii
GCA_963537855.1	CAUTHD000000000	SAMEA114447315	Actinomyces massiliensis
GCA_963536725.1	CAUTBX000000000	SAMEA114447329	Actinomyces oris
GCA_963536515.1	CAUTCB000000000	SAMEA114447337	Actinomyces oris
GCA_963532775.1	CAUSLU000000000	SAMEA114447238	Alloprevotella tannerae
GCA_963536485.1	CAUTAJ000000000	SAMEA114447309	Alloprevotella tannerae
GCA_963533895.1	CAUSQV000000000	SAMEA114447200	Bacteroides heparinolyticus
GCA_963531645.1	CAUSIS000000000	SAMEA114447227	Bifidobacterium longum
GCA_963536955.1	CAUTDM000000000	SAMEA114447288	Campylobacter concisus
GCA_963538155.1	CAUTHJ000000000	SAMEA114447272	Campylobacter showae
GCA_963536205.1	CAUSYT000000000	SAMEA114447300	Candidatus Nanosyncoccus nanoralicus
GCA_963535115.1	CAUSVQ000000000	SAMEA114447287	Capnocytophaga gingivalis
GCA_963535395.1	CAUSWV000000000	SAMEA114447319	Capnocytophaga granulosa
GCA_963538535.1	CAUTHO000000000	SAMEA114447260	Capnocytophaga leadbetteri
GCA_963536085.1	CAUSZM000000000	SAMEA114447355	Capnocytophaga sputigena
GCA_963536295.1	CAUTBE000000000	SAMEA114447322	Corynebacterium durum
GCA_963531035.1	CAUSGQ000000000	SAMEA114447203	Corynebacterium kroppenstedtii
GCA_963536265.1	CAUSZY000000000	SAMEA114447297	Corynebacterium matruchotii
GCA_963538505.1	CAUTJG000000000	SAMEA114447338	Corynebacterium matruchotii
GCA_963537245.1	CAUTEF000000000	SAMEA114447306	Dialister invisus
GCA_963531505.1	CAUSIN000000000	SAMEA114447201	Filifactor alocis
GCA_963534135.1	CAUSSE000000000	SAMEA114447249	Fusobacterium pseudoperiodonticum
GCA_963535645.1	CAUSXW000000000	SAMEA114447351	Fusobacterium pseudoperiodonticum
GCA_963538285.1	CAUTID000000000	SAMEA114447321	Gemella sanguinis
GCA_963532545.1	CAUSMZ000000000	SAMEA114447209	Haemophilus parainfluenzae
GCA_963534085.1	CAUSSA000000000	SAMEA114447219	Haemophilus parainfluenzae
GCA_963533775.1	CAUSQW000000000	SAMEA114447245	Haemophilus parainfluenzae
GCA_963536385.1	CAUTBC000000000	SAMEA114447341	Hoylesella loescheii
GCA_963538465.1	CAUTHS000000000	SAMEA114447331	Hoylesella nanceiensis
GCA_963538125.1	CAUTGC000000000	SAMEA114447295	Hoylesella shahii
GCA_963533925.1	CAUSRG000000000	SAMEA114447196	Lancefieldella parvula
GCA_963532375.1	CAUSKU000000000	SAMEA114447234	Lancefieldella parvula
GCA_963530955.1	CAUSFQ000000000	SAMEA114447244	Lancefieldella parvula
GCA_963532475.1	CAUSMW000000000	SAMEA114447230	Lautropia dentalis
GCA_963533825.1	CAUSQH000000000	SAMEA114447251	Lautropia mirabilis
GCA_963538355.1	CAUTHZ000000000	SAMEA114447285	Leptotrichia wadei
GCA_963538315.1	CAUTHX000000000	SAMEA114447271	Megasphaera micronuciformis
GCA_963530905.1	CAUSFX000000000	SAMEA114447248	Neisseria elongata
GCA_963538605.1	CAUTHV000000000	SAMEA114447356	Neisseria flavescens
GCA_963534015.1	CAUSSI000000000	SAMEA114447247	Neisseria lactamica
GCA_963535665.1	CAUSXY000000000	SAMEA114447347	Oribacterium asaccharolyticum
GCA_963536935.1	CAUTDC000000000	SAMEA114447280	Oribacterium parvum
GCA_963534885.1	CAUSVN000000000	SAMEA114447268	Oribacterium sinus
GCA_963536115.1	CAUSZV000000000	SAMEA114447346	Oribacterium sinus
GCA_963532135.1	CAUSKD000000000	SAMEA114447199	Oribacterium sinus
GCA_963535555.1	CAUSXJ000000000	SAMEA114447349	Parvimonas micra
GCA_963536395.1	CAUTAI000000000	SAMEA114447334	Peptostreptococcus stomatis
GCA_963535015.1	CAUSVC000000000	SAMEA114447273	Porphyromonas endodontalis
GCA_963532935.1	CAUSLW000000000	SAMEA114447204	Porphyromonas gingivalis
GCA_963534745.1	CAUSUB000000000	SAMEA114447353	Prevotella aurantiaca
GCA_963531315.1	CAUSHN000000000	SAMEA114447194	Prevotella denticola
GCA_963530875.1	CAUSFZ000000000	SAMEA114447246	Prevotella histicola
GCA_963532565.1	CAUSNE000000000	SAMEA114447208	Prevotella intermedia
GCA_963531525.1	CAUSHV000000000	SAMEA114447229	Prevotella jejuni
GCA_963538685.1	CAUTIM000000000	SAMEA114447340	Prevotella koreensis
GCA_963531845.1	CAUSIF000000000	SAMEA114447213	Prevotella melaninogenica
GCA_963535525.1	CAUSXF000000000	SAMEA114447330	Prevotella melaninogenica
GCA_963534155.1	CAUSQN000000000	SAMEA114447185	Prevotella pallens
GCA_963538385.1	CAUTJJ000000000	SAMEA114447344	Prevotella veroralis
GCA_963531705.1	CAUSIA000000000	SAMEA114447221	Rothia aeria
GCA_963536915.1	CAUTCD000000000	SAMEA114447323	Rothia dentocariosa
GCA_963531625.1	CAUSIZ000000000	SAMEA114447226	Rothia dentocariosa
GCA_963533985.1	CAUSRM000000000	SAMEA114447193	Rothia mucilaginosa
GCA_963530645.1	CAUSFM000000000	SAMEA114447259	Rothia mucilaginosa
GCA_963530835.1	CAUSGD000000000	SAMEA114447255	Rothia mucilaginosa
GCA_963537815.1	CAUTFY000000000	SAMEA114447318	Rothia mucilaginosa
GCA_963533835.1	CAUSPZ000000000	SAMEA114447218	Rothia mucilaginosa
GCA_963532905.1	CAUSMT000000000	SAMEA114447192	Scardovia wiggsiae
GCA_963538585.1	CAUTIV000000000	SAMEA114447328	Schaalia odontolytica
GCA_963536895.1	CAUTBY000000000	SAMEA114447333	Segatella salivae
GCA_963539305.1	CAUTLY000000000	SAMEA114447354	Stomatobaculum longum
GCA_963533025.1	CAUSNF000000000	SAMEA114447215	Streptococcus parasanguinis
GCA_963535895.1	CAUSYO000000000	SAMEA114447299	Streptococcus salivarius
GCA_963538245.1	CAUTIF000000000	SAMEA114447325	Streptococcus salivarius
GCA_963537785.1	CAUTGG000000000	SAMEA114447305	Streptococcus salivarius
GCA_963534855.1	CAUSUQ000000000	SAMEA114447307	Streptococcus sanguinis
GCA_963533965.1	CAUSRC000000000	SAMEA114447216	Tannerella forsythia
GCA_963533795.1	CAUSRJ000000000	SAMEA114447190	Veillonella parvula
GCA_963535815.1	CAUSYH000000000	SAMEA114447324	Veillonella tobetsuensis
GCA_963531575.1	CAUSHL000000000	SAMEA114447232	[Eubacterium] saphenum
GCA_963532655.1	CAUSMH000000000	SAMEA114447186	[Eubacterium] sulci
GCA_963538645.1	CAUTHY000000000	SAMEA114447275	[Eubacterium] sulci
GCA_963534175.1	CAUSQP000000000	SAMEA114447207	uncultured Acholeplasmataceae bacterium
GCA_963537425.1	CAUTEU000000000	SAMEA114447320	uncultured Actinobaculum sp.
GCA_963534985.1	CAUSVL000000000	SAMEA114447293	uncultured Actinomyces sp.
GCA_963534355.1	CAUSSR000000000	SAMEA114447183	uncultured Actinomyces sp.
GCA_963535775.1	CAUSYK000000000	SAMEA114447345	uncultured Actinomyces sp.
GCA_963532385.1	CAUSKN000000000	SAMEA114447228	uncultured Actinomyces sp.
GCA_963531605.1	CAUSHZ000000000	SAMEA114447188	uncultured Actinomyces sp.
GCA_963536645.1	CAUTBP000000000	SAMEA114447308	uncultured Actinomyces sp.
GCA_963539085.1	CAUTKX000000000	SAMEA114447274	uncultured Actinomyces sp.
GCA_963534165.1	CAUSSH000000000	SAMEA114447224	uncultured Actinomyces sp.
GCA_963531125.1	CAUSFP000000000	SAMEA114447256	uncultured Alloprevotella sp.
GCA_963535565.1	CAUSXM000000000	SAMEA114447335	uncultured Atopobium sp.
GCA_963532085.1	CAUSJN000000000	SAMEA114447197	uncultured Bacteroidales bacterium
GCA_963533635.1	CAUSPQ000000000	SAMEA114447206	uncultured Bacteroidia bacterium
GCA_963536285.1	CAUSZG000000000	SAMEA114447292	uncultured Bacteroidia bacterium
GCA_963536655.1	CAUTBO000000000	SAMEA114447311	uncultured Bergeyella sp.
GCA_963530995.1	CAUSER000000000	SAMEA114447266	uncultured Campylobacter sp.
GCA_963532215.1	CAUSKF000000000	SAMEA114447187	uncultured Candidatus Saccharibacteria bacterium
GCA_963539185.1	CAUTKJ000000000	SAMEA114447276	uncultured Candidatus Saccharibacteria bacterium
GCA_963537595.1	CAUTFG000000000	SAMEA114447313	uncultured Candidatus Saccharibacteria bacterium
GCA_963535445.1	CAUSWA000000000	SAMEA114447284	uncultured Candidatus Saccharibacteria bacterium
GCA_963535585.1	CAUSXC000000000	SAMEA114447342	uncultured Candidatus Saccharibacteria bacterium
GCA_963535965.1	CAUSYP000000000	SAMEA114447296	uncultured Candidatus Saccharibacteria bacterium
GCA_963531135.1	CAUSFJ000000000	SAMEA114447240	uncultured Candidatus Saccharibacteria bacterium
GCA_963532505.1	CAUSLX000000000	SAMEA114447223	uncultured Candidatus Saccharibacteria bacterium
GCA_963538065.1	CAUTFL000000000	SAMEA114447302	uncultured Candidatus Saccharibacteria bacterium
GCA_963536065.1	CAUSYU000000000	SAMEA114447339	uncultured Candidatus Saccharibacteria bacterium
GCA_963536825.1	CAUTAR000000000	SAMEA114447286	uncultured Candidatus Saccharibacteria bacterium
GCA_963534385.1	CAUSSQ000000000	SAMEA114447189	uncultured Candidatus Saccharibacteria bacterium
GCA_963531185.1	CAUSEN000000000	SAMEA114447252	uncultured Candidatus Saccharimonas sp.
GCA_963534205.1	CAUSRQ000000000	SAMEA114447184	uncultured Capnocytophaga sp.
GCA_963538395.1	CAUTIN000000000	SAMEA114447350	uncultured Capnocytophaga sp.
GCA_963532875.1	CAUSLO000000000	SAMEA114447214	uncultured Clostridia bacterium
GCA_963534225.1	CAUSQJ000000000	SAMEA114447210	uncultured Clostridia bacterium
GCA_963535465.1	CAUSWF000000000	SAMEA114447327	uncultured Erysipelotrichaceae bacterium
GCA_963534835.1	CAUSUL000000000	SAMEA114447265	uncultured Eubacteriales bacterium
GCA_963531155.1	CAUSGE000000000	SAMEA114447243	uncultured Eubacteriales bacterium
GCA_963536105.1	CAUSYX000000000	SAMEA114447332	uncultured Eubacteriales bacterium
GCA_963536495.1	CAUTAF000000000	SAMEA114447301	uncultured Eubacteriales bacterium
GCA_963537845.1	CAUTGS000000000	SAMEA114447277	uncultured Flavobacteriaceae bacterium
GCA_963538955.1	CAUTLK000000000	SAMEA114447291	uncultured Fusobacterium sp.
GCA_963532255.1	CAUSKO000000000	SAMEA114447237	uncultured Gemella sp.
GCA_963538665.1	CAUTHU000000000	SAMEA114447343	uncultured Haemophilus sp.
GCA_963536835.1	CAUTCH000000000	SAMEA114447263	uncultured Johnsonella sp.
GCA_963535045.1	CAUSUV000000000	SAMEA114447283	uncultured Lachnospiraceae bacterium
GCA_963534595.1	CAUSTM000000000	SAMEA114447290	uncultured Leptotrichia sp.
GCA_963536055.1	CAUSZJ000000000	SAMEA114447303	uncultured Mitsuokella sp.
GCA_963536255.1	CAUSZN000000000	SAMEA114447294	uncultured Mogibacterium sp.
GCA_963534195.1	CAUSQC000000000	SAMEA114447241	uncultured Moraxella sp.
GCA_963533875.1	CAUSQD000000000	SAMEA114447202	uncultured Mycoplasma sp.
GCA_963531245.1	CAUSGU000000000	SAMEA114447242	uncultured Neisseria sp.
GCA_963531095.1	CAUSFC000000000	SAMEA114447257	uncultured Neisseria sp.
GCA_963532485.1	CAUSME000000000	SAMEA114447231	uncultured Neisseria sp.
GCA_963531275.1	CAUSHT000000000	SAMEA114447198	uncultured Neisseria sp.
GCA_963531675.1	CAUSJD000000000	SAMEA114447220	uncultured Olsenella sp.
GCA_963531555.1	CAUSIX000000000	SAMEA114447225	uncultured Oribacterium sp.
GCA_963536865.1	CAUTAX000000000	SAMEA114447261	uncultured Ottowia sp.
GCA_963538345.1	CAUTHI000000000	SAMEA114447264	uncultured Parvimonas sp.
GCA_963533755.1	CAUSQE000000000	SAMEA114447181	uncultured Peptostreptococcus sp.
GCA_963531325.1	CAUSIQ000000000	SAMEA114447205	uncultured Porphyromonadaceae bacterium
GCA_963535935.1	CAUSZD000000000	SAMEA114447289	uncultured Porphyromonadaceae bacterium
GCA_963534025.1	CAUSQQ000000000	SAMEA114447250	uncultured Porphyromonas sp.
GCA_963531225.1	CAUSFA000000000	SAMEA114447262	uncultured Porphyromonas sp.
GCA_963536585.1	CAUTAQ000000000	SAMEA114447278	uncultured Prevotella sp.
GCA_963539105.1	CAUTKN000000000	SAMEA114447281	uncultured Prevotella sp.
GCA_963531205.1	CAUSGA000000000	SAMEA114447258	uncultured Prevotella sp.
GCA_963533065.1	CAUSMJ000000000	SAMEA114447211	uncultured Prevotella sp.
GCA_963535925.1	CAUSZA000000000	SAMEA114447279	uncultured Prevotella sp.
GCA_963538175.1	CAUTHH000000000	SAMEA114447270	uncultured Prevotellaceae bacterium
GCA_963533905.1	CAUSQB000000000	SAMEA114447182	uncultured Prevotellaceae bacterium
GCA_963537325.1	CAUTDG000000000	SAMEA114447304	uncultured Prevotellaceae bacterium
GCA_963531695.1	CAUSHD000000000	SAMEA114447222	uncultured Rothia sp.
GCA_963530795.1	CAUSGL000000000	SAMEA114447254	uncultured Selenomonas sp.
GCA_963538615.1	CAUTJI000000000	SAMEA114447269	uncultured Selenomonas sp.
GCA_963538635.1	CAUTJD000000000	SAMEA114447348	uncultured Solobacterium sp.
GCA_963538235.1	CAUTII000000000	SAMEA114447267	uncultured Solobacterium sp.
GCA_963535535.1	CAUSXE000000000	SAMEA114447326	uncultured Solobacterium sp.
GCA_963534275.1	CAUSRF000000000	SAMEA114447217	uncultured Streptococcus sp.
GCA_963538265.1	CAUTIB000000000	SAMEA114447310	uncultured Streptococcus sp.
GCA_963531265.1	CAUSGR000000000	SAMEA114447236	uncultured Streptococcus sp.
GCA_963534185.1	CAUSRH000000000	SAMEA114447191	uncultured Streptococcus sp.
GCA_963537065.1	CAUTDN000000000	SAMEA114447282	uncultured Tannerella sp.
GCA_963532985.1	CAUSNN000000000	SAMEA114447212	uncultured Treponema sp.
GCA_963538295.1	CAUTIS000000000	SAMEA114447352	uncultured Treponema sp.
GCA_963536635.1	CAUTBU000000000	SAMEA114447316	uncultured Treponema sp.
GCA_963533055.1	CAUSMO000000000	SAMEA114447233	uncultured Veillonella sp.
GCA_963538405.1	CAUTHN000000000	SAMEA114447336	uncultured Veillonella sp.
GCA_963533915.1	CAUSRK000000000	SAMEA114447235	uncultured Veillonella sp.
GCA_963531005.1	CAUSFK000000000	SAMEA114447253	uncultured bacterium
GCA_963532555.1	CAUSMG000000000	SAMEA114447195	uncultured bacterium
GCA_963530765.1	CAUSFD000000000	SAMEA114447239	uncultured bacterium
GCA_963537415.1	CAUTDF000000000	SAMEA114447298	uncultured bacterium
GCA_963536305.1	CAUTAD000000000	SAMEA114447317	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA762218 data set (Salivary Microbiome in Adenoid Cystic Carcinoma).

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