ID 546180 - BioProject

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Accession: PRJEB31298 ID: 546180

Study on the diversity of gut microorganisms in mice infected with different toxic H7N9 viruses

Accession	PRJEB31298
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Submission	Registration date: 4-Jun-2019 National Key Laboratory of Agricultural Microbiology

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1501
WGS master	207
SRA Experiments	813
Other datasets
BioSample	843
Assembly	207

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

207
207

Assembly	WGS	BioSample	Taxonomy
GCA_949841085.1	CATKYQ000000000	SAMEA112936206	Adlercreutzia equolifaciens
GCA_949948765.1	CATLHB000000000	SAMEA112936207	Alistipes indistinctus
GCA_949915805.1	CATLEP000000000	SAMEA112936320	Butyricimonas synergistica
GCA_949935605.1	CATLGH000000000	SAMEA112936308	Butyricimonas virosa
GCA_949927545.1	CATLEU000000000	SAMEA112936366	Candidatus Gastranaerophilus phascolarctosicola
GCA_949841505.1	CATKZJ000000000	SAMEA112936262	Lactobacillus hominis
GCA_949888035.1	CATLCE000000000	SAMEA112936299	Lactobacillus johnsonii
GCA_949888055.1	CATLCC000000000	SAMEA112936297	Limosilactobacillus urinaemulieris
GCA_949902765.1	CATLDL000000000	SAMEA112936375	Parabacteroides merdae
GCA_949902615.1	CATLDU000000000	SAMEA112936354	uncultured Acetatifactor sp.
GCA_949902585.1	CATLDJ000000000	SAMEA112936379	uncultured Acetatifactor sp.
GCA_949893795.1	CATLCT000000000	SAMEA112936346	uncultured Acetatifactor sp.
GCA_949893845.1	CATLCQ000000000	SAMEA112936340	uncultured Acetatifactor sp.
GCA_949927445.1	CATLFC000000000	SAMEA112936332	uncultured Acetatifactor sp.
GCA_949935865.1	CATLGS000000000	SAMEA112936289	uncultured Acetatifactor sp.
GCA_949878675.1	CATLBB000000000	SAMEA112936224	uncultured Alistipes sp.
GCA_949841025.1	CATKXU000000000	SAMEA112936204	uncultured Alistipes sp.
GCA_949840605.1	CATKXN000000000	SAMEA112936254	uncultured Alistipes sp.
GCA_949935775.1	CATLFO000000000	SAMEA112936339	uncultured Alistipes sp.
GCA_949902795.1	CATLDD000000000	SAMEA112936355	uncultured Alistipes sp.
GCA_949841555.1	CATKZU000000000	SAMEA112936268	uncultured Allobaculum sp.
GCA_949878975.1	CATLBM000000000	SAMEA112936208	uncultured Alphaproteobacteria bacterium
GCA_949878575.1	CATLAX000000000	SAMEA112936244	uncultured Alphaproteobacteria bacterium
GCA_949893735.1	CATLCS000000000	SAMEA112936304	uncultured Alphaproteobacteria bacterium
GCA_949935815.1	CATLFY000000000	SAMEA112936307	uncultured Alphaproteobacteria bacterium
GCA_949924705.1	CATLER000000000	SAMEA112936361	uncultured Alphaproteobacteria bacterium
GCA_949959315.1	CATLIS000000000	SAMEA112936177	uncultured Alphaproteobacteria bacterium
GCA_949841475.1	CATKZF000000000	SAMEA112936276	uncultured Anaeroplasmataceae bacterium
GCA_949948805.1	CATLHD000000000	SAMEA112936233	uncultured Bacilli bacterium
GCA_949948905.1	CATLHO000000000	SAMEA112936222	uncultured Bacilli bacterium
GCA_949949055.1	CATLHT000000000	SAMEA112936223	uncultured Bacilli bacterium
GCA_949948975.1	CATLHU000000000	SAMEA112936195	uncultured Bacilli bacterium
GCA_949959195.1	CATLIT000000000	SAMEA112936178	uncultured Bacilli bacterium
GCA_949956995.1	CATLIM000000000	SAMEA112936221	uncultured Bacilli bacterium
GCA_949841305.1	CATLAC000000000	SAMEA112936269	uncultured Bacilli bacterium
GCA_949841435.1	CATKZS000000000	SAMEA112936256	uncultured Bacilli bacterium
GCA_949841625.1	CATKZG000000000	SAMEA112936179	uncultured Bacilli bacterium
GCA_949893875.1	CATLCK000000000	SAMEA112936287	uncultured Bacilli bacterium
GCA_949902605.1	CATLDP000000000	SAMEA112936376	uncultured Bacilli bacterium
GCA_949879835.1	CATLBU000000000	SAMEA112936201	uncultured Bacilli bacterium
GCA_949949125.1	CATLHY000000000	SAMEA112936196	uncultured Bacteroidales bacterium
GCA_949959275.1	CATLIZ000000000	SAMEA112936218	uncultured Bacteroidales bacterium
GCA_949888005.1	CATLCD000000000	SAMEA112936317	uncultured Bacteroidales bacterium
GCA_949841065.1	CATKYN000000000	SAMEA112936214	uncultured Bacteroidales bacterium
GCA_949878505.1	CATLAQ000000000	SAMEA112936225	uncultured Candidatus Melainabacteria bacterium
GCA_949841365.1	CATKZI000000000	SAMEA112936267	uncultured Candidatus Melainabacteria bacterium
GCA_949902595.1	CATLDC000000000	SAMEA112936365	uncultured Candidatus Melainabacteria bacterium
GCA_949915775.1	CATLEG000000000	SAMEA112936368	uncultured Candidatus Melainabacteria bacterium
GCA_949927415.1	CATLFB000000000	SAMEA112936324	uncultured Candidatus Melainabacteria bacterium
GCA_949916095.1	CATLDX000000000	SAMEA112936336	uncultured Candidatus Saccharibacteria bacterium
GCA_949902725.1	CATLDA000000000	SAMEA112936357	uncultured Candidatus Saccharibacteria bacterium
GCA_949840965.1	CATKYH000000000	SAMEA112936193	uncultured Candidatus Saccharibacteria bacterium
GCA_949840665.1	CATKXF000000000	SAMEA112936250	uncultured Candidatus Saccharibacteria bacterium
GCA_949949065.1	CATLHR000000000	SAMEA112936186	uncultured Christensenella sp.
GCA_949956965.1	CATLIQ000000000	SAMEA112936182	uncultured Christensenella sp.
GCA_949956985.1	CATLIR000000000	SAMEA112936180	uncultured Christensenella sp.
GCA_949840785.1	CATKXP000000000	SAMEA112936247	uncultured Christensenella sp.
GCA_949878455.1	CATLAV000000000	SAMEA112936232	uncultured Christensenella sp.
GCA_949841595.1	CATKZB000000000	SAMEA112936257	uncultured Christensenella sp.
GCA_949879845.1	CATLBP000000000	SAMEA112936188	uncultured Christensenella sp.
GCA_949915885.1	CATLEE000000000	SAMEA112936370	uncultured Christensenella sp.
GCA_949935875.1	CATLGI000000000	SAMEA112936303	uncultured Christensenella sp.
GCA_949935825.1	CATLFR000000000	SAMEA112936373	uncultured Christensenella sp.
GCA_949935765.1	CATLFS000000000	SAMEA112936306	uncultured Christensenella sp.
GCA_949902685.1	CATLDS000000000	SAMEA112936374	uncultured Christensenellaceae bacterium
GCA_949949135.1	CATLII000000000	SAMEA112936245	uncultured Clostridia bacterium
GCA_949948835.1	CATLHF000000000	SAMEA112936227	uncultured Clostridia bacterium
GCA_949949035.1	CATLHJ000000000	SAMEA112936234	uncultured Clostridia bacterium
GCA_949841165.1	CATKYU000000000	SAMEA112936275	uncultured Clostridia bacterium
GCA_949902715.1	CATLDH000000000	SAMEA112936351	uncultured Clostridia bacterium
GCA_949927525.1	CATLFM000000000	SAMEA112936319	uncultured Clostridia bacterium
GCA_949916145.1	CATLED000000000	SAMEA112936288	uncultured Clostridia bacterium
GCA_949887975.1	CATLCB000000000	SAMEA112936342	uncultured Clostridia bacterium
GCA_949935895.1	CATLGL000000000	SAMEA112936360	uncultured Clostridia bacterium
GCA_949935755.1	CATLFW000000000	SAMEA112936291	uncultured Clostridia bacterium
GCA_949927425.1	CATLEW000000000	SAMEA112936367	uncultured Clostridia bacterium
GCA_949927455.1	CATLEX000000000	SAMEA112936314	uncultured Clostridia bacterium
GCA_949927585.1	CATLFA000000000	SAMEA112936280	uncultured Clostridiaceae bacterium
GCA_949902805.1	CATLDI000000000	SAMEA112936369	uncultured Clostridiaceae bacterium
GCA_949841235.1	CATKZA000000000	SAMEA112936271	uncultured Clostridiaceae bacterium
GCA_949879855.1	CATLBX000000000	SAMEA112936205	uncultured Coriobacteriia bacterium
GCA_949927555.1	CATLEZ000000000	SAMEA112936301	uncultured Desulfovibrio sp.
GCA_949927465.1	CATLFD000000000	SAMEA112936331	uncultured Dorea sp.
GCA_949916155.1	CATLEM000000000	SAMEA112936284	uncultured Dorea sp.
GCA_949879805.1	CATLBY000000000	SAMEA112936200	uncultured Dorea sp.
GCA_949840335.1	CATKWW000000000	SAMEA112936235	uncultured Dorea sp.
GCA_949956975.1	CATLIO000000000	SAMEA112936217	uncultured Dorea sp.
GCA_949841215.1	CATKYV000000000	SAMEA112936198	uncultured Duncaniella sp.
GCA_949927605.1	CATLFJ000000000	SAMEA112936356	uncultured Duncaniella sp.
GCA_949840985.1	CATKXT000000000	SAMEA112936236	uncultured Eggerthellaceae bacterium
GCA_949949105.1	CATLHQ000000000	SAMEA112936197	uncultured Eggerthellaceae bacterium
GCA_949841385.1	CATKZM000000000	SAMEA112936252	uncultured Elusimicrobiales bacterium
GCA_949878465.1	CATLAO000000000	SAMEA112936211	uncultured Erysipelotrichaceae bacterium
GCA_949840345.1	CATKWX000000000	SAMEA112936277	uncultured Eubacteriales bacterium
GCA_949948855.1	CATLHS000000000	SAMEA112936203	uncultured Eubacteriales bacterium
GCA_949878535.1	CATLAS000000000	SAMEA112936243	uncultured Eubacteriales bacterium
GCA_949841245.1	CATKYT000000000	SAMEA112936264	uncultured Eubacteriales bacterium
GCA_949935595.1	CATLGA000000000	SAMEA112936337	uncultured Eubacteriales bacterium
GCA_949893855.1	CATLCU000000000	SAMEA112936290	uncultured Eubacteriales bacterium
GCA_949893745.1	CATLCN000000000	SAMEA112936286	uncultured Eubacterium sp.
GCA_949892795.1	CATLCI000000000	SAMEA112936309	uncultured Eubacterium sp.
GCA_949888075.1	CATLCA000000000	SAMEA112936345	uncultured Eubacterium sp.
GCA_949915975.1	CATLEB000000000	SAMEA112936292	uncultured Eubacterium sp.
GCA_949935855.1	CATLFQ000000000	SAMEA112936305	uncultured Eubacterium sp.
GCA_949841105.1	CATKYR000000000	SAMEA112936266	uncultured Eubacterium sp.
GCA_949948915.1	CATLHH000000000	SAMEA112936231	uncultured Eubacterium sp.
GCA_949949025.1	CATLHZ000000000	SAMEA112936181	uncultured Eubacterium sp.
GCA_949879025.1	CATLBO000000000	SAMEA112936241	uncultured Hungatella sp.
GCA_949915955.1	CATLEI000000000	SAMEA112936381	uncultured Hungatella sp.
GCA_949840485.1	CATKXD000000000	SAMEA112936255	uncultured Lachnoclostridium sp.
GCA_949916105.1	CATLEF000000000	SAMEA112936380	uncultured Lachnospira sp.
GCA_949957035.1	CATLIP000000000	SAMEA112936192	uncultured Lachnospiraceae bacterium
GCA_949960045.1	CATLJF000000000	SAMEA112936194	uncultured Lachnospiraceae bacterium
GCA_949948885.1	CATLIB000000000	SAMEA112936184	uncultured Lachnospiraceae bacterium
GCA_949949085.1	CATLIA000000000	SAMEA112936187	uncultured Lachnospiraceae bacterium
GCA_949924695.1	CATLES000000000	SAMEA112936285	uncultured Lachnospiraceae bacterium
GCA_949927515.1	CATLFI000000000	SAMEA112936293	uncultured Lachnospiraceae bacterium
GCA_949927485.1	CATLFH000000000	SAMEA112936352	uncultured Lachnospiraceae bacterium
GCA_949927435.1	CATLFL000000000	SAMEA112936334	uncultured Lachnospiraceae bacterium
GCA_949935715.1	CATLGD000000000	SAMEA112936335	uncultured Lachnospiraceae bacterium
GCA_949935735.1	CATLGM000000000	SAMEA112936295	uncultured Lachnospiraceae bacterium
GCA_949935685.1	CATLGN000000000	SAMEA112936344	uncultured Lachnospiraceae bacterium
GCA_949935705.1	CATLGQ000000000	SAMEA112936279	uncultured Lachnospiraceae bacterium
GCA_949915925.1	CATLEL000000000	SAMEA112936371	uncultured Lachnospiraceae bacterium
GCA_949915905.1	CATLEQ000000000	SAMEA112936323	uncultured Lachnospiraceae bacterium
GCA_949916015.1	CATLDZ000000000	SAMEA112936329	uncultured Lachnospiraceae bacterium
GCA_949879775.1	CATLBW000000000	SAMEA112936242	uncultured Lachnospiraceae bacterium
GCA_949893805.1	CATLCM000000000	SAMEA112936311	uncultured Lachnospiraceae bacterium
GCA_949893755.1	CATLCV000000000	SAMEA112936318	uncultured Lachnospiraceae bacterium
GCA_949893915.1	CATLCO000000000	SAMEA112936315	uncultured Lachnospiraceae bacterium
GCA_949893925.1	CATLCR000000000	SAMEA112936341	uncultured Lachnospiraceae bacterium
GCA_949840325.1	CATKWV000000000	SAMEA112936239	uncultured Lachnospiraceae bacterium
GCA_949840625.1	CATKXL000000000	SAMEA112936272	uncultured Lachnospiraceae bacterium
GCA_949841005.1	CATKYC000000000	SAMEA112936248	uncultured Lachnospiraceae bacterium
GCA_949840925.1	CATKYK000000000	SAMEA112936220	uncultured Lachnospiraceae bacterium
GCA_949878755.1	CATLBK000000000	SAMEA112936219	uncultured Lachnospiraceae bacterium
GCA_949841455.1	CATKZV000000000	SAMEA112936260	uncultured Lachnospiraceae bacterium
GCA_949841495.1	CATLAA000000000	SAMEA112936258	uncultured Lachnospiraceae bacterium
GCA_949841185.1	CATKZE000000000	SAMEA112936246	uncultured Lachnospiraceae bacterium
GCA_949841485.1	CATKZQ000000000	SAMEA112936270	uncultured Lachnospiraceae bacterium
GCA_949841545.1	CATKZY000000000	SAMEA112936263	uncultured Lachnospiraceae bacterium
GCA_949841525.1	CATKZZ000000000	SAMEA112936253	uncultured Mailhella sp.
GCA_949949045.1	CATLHL000000000	SAMEA112936212	uncultured Muribaculaceae bacterium
GCA_949948845.1	CATLIC000000000	SAMEA112936209	uncultured Muribaculaceae bacterium
GCA_949948955.1	CATLHP000000000	SAMEA112936185	uncultured Muribaculaceae bacterium
GCA_949948925.1	CATLHN000000000	SAMEA112936176	uncultured Muribaculaceae bacterium
GCA_949948755.1	CATLGZ000000000	SAMEA112936228	uncultured Muribaculaceae bacterium
GCA_949959295.1	CATLIY000000000	SAMEA112936229	uncultured Muribaculaceae bacterium
GCA_949949075.1	CATLHW000000000	SAMEA112936210	uncultured Muribaculaceae bacterium
GCA_949959325.1	CATLIU000000000	SAMEA112936175	uncultured Muribaculaceae bacterium
GCA_949841405.1	CATLAG000000000	SAMEA112936261	uncultured Muribaculaceae bacterium
GCA_949878525.1	CATLAP000000000	SAMEA112936190	uncultured Muribaculaceae bacterium
GCA_949878515.1	CATLAW000000000	SAMEA112936240	uncultured Muribaculaceae bacterium
GCA_949841035.1	CATKYF000000000	SAMEA112936213	uncultured Muribaculaceae bacterium
GCA_949892785.1	CATLCH000000000	SAMEA112936296	uncultured Muribaculaceae bacterium
GCA_949892805.1	CATLCJ000000000	SAMEA112936282	uncultured Muribaculaceae bacterium
GCA_949902635.1	CATLDE000000000	SAMEA112936349	uncultured Muribaculaceae bacterium
GCA_949902785.1	CATLDK000000000	SAMEA112936358	uncultured Muribaculaceae bacterium
GCA_949902665.1	CATLDB000000000	SAMEA112936350	uncultured Muribaculaceae bacterium
GCA_949902645.1	CATLDO000000000	SAMEA112936363	uncultured Muribaculaceae bacterium
GCA_949935725.1	CATLGJ000000000	SAMEA112936359	uncultured Muribaculaceae bacterium
GCA_949935845.1	CATLGP000000000	SAMEA112936281	uncultured Muribaculaceae bacterium
GCA_949935835.1	CATLGG000000000	SAMEA112936364	uncultured Muribaculaceae bacterium
GCA_949927505.1	CATLFG000000000	SAMEA112936294	uncultured Muribaculaceae bacterium
GCA_949915855.1	CATLDY000000000	SAMEA112936353	uncultured Muribaculaceae bacterium
GCA_949915845.1	CATLEA000000000	SAMEA112936330	uncultured Muribaculaceae bacterium
GCA_949840495.1	CATKXB000000000	SAMEA112936278	uncultured Muribaculum sp.
GCA_949959175.1	CATLIV000000000	SAMEA112936230	uncultured Oscillibacter sp.
GCA_949927495.1	CATLFN000000000	SAMEA112936300	uncultured Oscillibacter sp.
GCA_949935675.1	CATLGC000000000	SAMEA112936316	uncultured Oscillibacter sp.
GCA_949888025.1	CATLCG000000000	SAMEA112936325	uncultured Oscillibacter sp.
GCA_949879825.1	CATLBS000000000	SAMEA112936183	uncultured Oscillibacter sp.
GCA_949887985.1	CATLCF000000000	SAMEA112936302	uncultured Oscillospiraceae bacterium
GCA_949902625.1	CATLDQ000000000	SAMEA112936348	uncultured Oscillospiraceae bacterium
GCA_949916185.1	CATLEK000000000	SAMEA112936313	uncultured Oscillospiraceae bacterium
GCA_949948775.1	CATLHC000000000	SAMEA112936199	uncultured Oscillospiraceae bacterium
GCA_949935795.1	CATLFX000000000	SAMEA112936298	uncultured Oscillospiraceae bacterium
GCA_949935745.1	CATLGF000000000	SAMEA112936321	uncultured Oscillospiraceae bacterium
GCA_949927575.1	CATLEY000000000	SAMEA112936377	uncultured Oscillospiraceae bacterium
GCA_949916125.1	CATLEJ000000000	SAMEA112936343	uncultured Oscillospiraceae bacterium
GCA_949924715.1	CATLET000000000	SAMEA112936328	uncultured Oscillospiraceae bacterium
GCA_949927405.1	CATLFF000000000	SAMEA112936372	uncultured Oscillospiraceae bacterium
GCA_949935635.1	CATLGO000000000	SAMEA112936326	uncultured Oscillospiraceae bacterium
GCA_949841465.1	CATKZW000000000	SAMEA112936259	uncultured Oscillospiraceae bacterium
GCA_949878405.1	CATLAI000000000	SAMEA112936216	uncultured Oscillospiraceae bacterium
GCA_949878475.1	CATLAN000000000	SAMEA112936226	uncultured Oscillospiraceae bacterium
GCA_949840645.1	CATKXG000000000	SAMEA112936273	uncultured Oscillospiraceae bacterium
GCA_949840825.1	CATKYB000000000	SAMEA112936265	uncultured Oscillospiraceae bacterium
GCA_949949115.1	CATLIH000000000	SAMEA112936215	uncultured Oscillospiraceae bacterium
GCA_949949145.1	CATLID000000000	SAMEA112936191	uncultured Oscillospiraceae bacterium
GCA_949878545.1	CATLAT000000000	SAMEA112936202	uncultured Parabacteroides sp.
GCA_949902745.1	CATLDF000000000	SAMEA112936378	uncultured Paraprevotella sp.
GCA_949935695.1	CATLGB000000000	SAMEA112936322	uncultured Peptococcaceae bacterium
GCA_949935805.1	CATLFV000000000	SAMEA112936362	uncultured Porphyromonadaceae bacterium
GCA_949840835.1	CATKXZ000000000	SAMEA112936237	uncultured Prevotella sp.
GCA_949841255.1	CATKYS000000000	SAMEA112936251	uncultured Prevotellamassilia sp.
GCA_949840575.1	CATKXM000000000	SAMEA112936274	uncultured Pseudomonas sp.
GCA_949893765.1	CATLCP000000000	SAMEA112936347	uncultured Ruminococcus sp.
GCA_949957005.1	CATLIL000000000	SAMEA112936238	uncultured Ruminococcus sp.
GCA_949840475.1	CATKXA000000000	SAMEA112936249	uncultured Thermoanaerobacterales bacterium
GCA_949935645.1	CATLGE000000000	SAMEA112936312	uncultured Treponema sp.
GCA_949935665.1	CATLFT000000000	SAMEA112936327	uncultured Vampirovibrio sp.
GCA_949935785.1	CATLGK000000000	SAMEA112936283	uncultured Vampirovibrio sp.
GCA_949927535.1	CATLEV000000000	SAMEA112936310	uncultured Vampirovibrio sp.
GCA_949948795.1	CATLGT000000000	SAMEA112936189	uncultured bacterium
GCA_949893905.1	CATLCW000000000	SAMEA112936338	uncultured bacterium
GCA_949893775.1	CATLCL000000000	SAMEA112936333	uncultured bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	1,796
Data volume, Tbytes	0.60

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Study on the diversity of gut microorganisms in mice infected with different toxic H7N9 viruses

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