8WG5: Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome

PDB ID: 8WG5Download
MMDB ID: 240717
PDB Deposition Date: 2023/9/20
Updated in MMDB: 2023/12
Experimental Method:
electron microscopy
Resolution: 3.05  Å
Source Organism:
Similar Structures:
Molecular Components in 8WG5
Label Count Molecule
Proteins (10 molecules)
1
Ubiquitin Carboxyl-terminal Hydrolase 16
(Gene symbol: USP16)
Molecule annotation
2
Histone H3.1
(Gene symbol: H3C1)
Molecule annotation
2
Histone H4
(Gene symbol: H4C1)
Molecule annotation
2
Histone H2A Type 1-b/e
(Gene symbol: H2AC4)
Molecule annotation
2
Histone H2B Type 1-K
(Gene symbol: H2BC12)
Molecule annotation
1
Ubiquitin B
(Gene symbol: UBB)
Molecule annotation
Nucleotides(2 molecules)
1
DNA (147-mer)
Molecule annotation
1
DNA (147-mer)
Molecule annotation
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303