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7XD1:
cryo-EM structure of unmodified nucleosome
PDB ID:
7XD1
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MMDB ID:
214694
PDB Deposition Date:
2022/3/26
Updated in MMDB:
2022/09
Experimental Method:
electron microscopy
Resolution:
3.2 Å
Source Organism:
synthetic construct
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Taxonomy
Molecule
synthetic construct
I, J
Homo sapiens
A, B, C, E, F, G, D, H
Similar Structures:
VAST+
Download sequence data
Molecular Components in 7XD1
Label
Count
Molecule
Proteins (8 molecules)
A
E
2
Histone H3
B
F
2
Histone H4
C
G
2
Histone H2A Type 1-b/e
D
H
2
Histone H2B Type 1-K
Nucleotides(2 molecules)
I
1
DNA (147-mer)
J
1
DNA (147-mer)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303