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1H5L:
X-Ray Induced Reduction Of Horseradish Peroxidase C1a Compound Iii (89-100% Dose)
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PDB ID:
1H5L
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MMDB ID:
19787
PDB Deposition Date:
2001/5/22
Updated in MMDB:
2007/10
Experimental Method:
x-ray diffraction
Resolution:
1.6 Å
Source Organism:
Armoracia rusticana
Similar Structures:
VAST+
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Biological Unit
Asymmetric Unit
Biological Unit for 1H5L: monomeric; determined by author and by software (PQS)
Molecular Graphic
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3D view
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Interactions
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A
A: PEROXIDASE C1A
1
ACT: Acetate Ion
2
CA: Calcium Ion
2
CA: Calcium Ion
3
HEM: Protoporphyrin Ix Containing Fe
4
PEO: Hydrogen Peroxide
4
PEO: Hydrogen Peroxide
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Protein
Nucleotide
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Format:
ASN.1 (Cn3D)
PDB
XML
JSON
PNG (image)
Data Set:
alpha-Carbons
Single 3D structure
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Molecular Components in 1H5L
Label
Count
Molecule
Protein (1 molecule)
A
1
Peroxidase C1A
1 Protein
SS Diagram
3D Domains
1
50
100
150
200
250
308
308 residues, click to see VAST similar structures.
helix 14-25
helix 32-45
helix 77-90
helix 97-112
helix 130-138
helix 145-155
helix 160-167
helix 199-209
helix 232-240
helix 260-269
helix 270-286
strand 56-59
strand 60-63
strand 172-177
strand 217-222
Domain 1 (1-141): click to see VAST similar structures
1
Domain 2 (142-308): click to see VAST similar structures
2
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Chemicals and Non-standard biopolymers (6 molecules)
1
1
Acetate Ion
2
2
Calcium Ion
3
1
Protoporphyrin Ix Containing Fe
4
2
Hydrogen Peroxide
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Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
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