6VFV: Crystal structure of human protocadherin 8 EC5-EC6

PDB ID: 6VFVDownload
MMDB ID: 185152
PDB Deposition Date: 2020/1/6
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 2.9  Å
Source Organism:
Similar Structures:
Biological Unit for 6VFV: monomeric; determined by author and by software (PISA)
Molecular Components in 6VFV
Label Count Molecule
Protein (1 molecule)
1
Protocadherin-8
(Gene symbol: PCDH8)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
2
alpha-D-mannopyranosealpha-D-mannopyranose
4
1
alpha-L-fucopyranosealpha-L-fucopyranose
5
4
CALCIUM IONCALCIUM ION
6
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
7
1
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303