Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX566883: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319782' containing sample 'VET1779S' from individual 'VET0028'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.6M spots, 920.2M bases, 410.7Mb downloads

UUID: be44b40d-a2bb-4146-9c99-f5204510f9f5

Design: Illumina sequencing of Staphylococcus aureus VET1779S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228894 • SRP042752 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1779S

SAMN02404384 • SRS626758 • All experiments • All runs

Organism: Staphylococcus aureus VET1779S

Library:

Name: Pond-319782

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470836.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDHQ

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55294

research_project: RP-513

root_sample_id: SM-4Q55K

sample_id: SM-5CDHQ

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.6M spots, 920.2M bases, 410.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1328278	2,253,463	455.2M	203.4Mb	2014-06-03
SRR1342119	2,302,116	465M	207.2Mb	2014-06-05

ID:: 809700

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