Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567852: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319768' containing sample 'VET0798S'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 765.8M bases, 349.6Mb downloads

UUID: 98753f93-d97a-42b6-8371-f746e9c9b493

Design: Illumina sequencing of Staphylococcus aureus VET0798S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228855 • SRP042897 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0798S

SAMN02404345 • SRS627006 • All experiments • All runs

Organism: Staphylococcus aureus VET0798S

Library:

Name: Pond-319768

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470822.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDHC

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55262

research_project: RP-513

root_sample_id: SM-4POA5

sample_id: SM-5CDHC

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 765.8M bases, 349.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1330221	1,916,568	387.1M	176.5Mb	2014-06-03
SRR1330418	1,874,593	378.7M	173.1Mb	2014-06-04

ID:: 810669

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