Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567414: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319798' containing sample 'VET1835R' from individual 'VET0084'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 475.2Mb downloads

UUID: 25e2fb52-b65c-4c5c-b628-2a17626c4eeb

Design: Illumina sequencing of Staphylococcus aureus VET1835R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228789 • SRP042852 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1835R

SAMN02404279 • SRS626920 • All experiments • All runs

Organism: Staphylococcus aureus VET1835R

Library:

Name: Pond-319798

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470852.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDI7

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55211

research_project: RP-513

root_sample_id: SM-4PO87

sample_id: SM-5CDI7

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 475.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1329289	2,543,661	513.8M	235.5Mb	2014-06-03
SRR1342377	2,595,467	524.3M	239.7Mb	2014-06-05

ID:: 810231

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