Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX547967: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318351' containing sample 'VET0439R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 864.9M bases, 395.6Mb downloads

UUID: 85a03ab0-ce68-4151-9316-bfd068c33f8b

Design: Illumina sequencing of Staphylococcus aureus VET0439R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0439R

SAMN02404244 • SRS616226 • All experiments • All runs

Organism: Staphylococcus aureus VET0439R

Library:

Name: Pond-318351

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470080.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8RY

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55182

research_project: RP-513

root_sample_id: SM-4PMWA

sample_id: SM-5C8RY

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 864.9M bases, 395.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293385	2,145,729	433.4M	198.1Mb	2014-05-21
SRR1293415	2,135,879	431.4M	197.5Mb	2014-05-21

ID:: 784925

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