Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567409: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318762' containing sample 'VET0280R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 14.1M spots, 2.8G bases, 1.4Gb downloads

UUID: 3f6257d4-7cad-4a66-8f50-9a3ef8923b33

Design: Illumina sequencing of Staphylococcus aureus VET0280R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0280R

SAMN02404132 • SRS626915 • All experiments • All runs

Organism: Staphylococcus aureus VET0280R

Library:

Name: Pond-318762

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471523.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLFV

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55362

research_project: RP-513

root_sample_id: SM-4Q5P8

sample_id: SM-5CLFV

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 14.1M spots, 2.8G bases, 1.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR1329283	3,515,418	710.1M	346.2Mb	2014-06-03
SRR1342187	3,495,033	706M	343.2Mb	2014-06-05
SRR1342330	3,546,200	716.3M	347.7Mb	2014-06-05
SRR1347544	3,518,565	710.8M	348.7Mb	2014-06-07

ID:: 810226

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Sequence Read Archive

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