Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567846: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318708' containing sample 'VET0193R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 14.4M spots, 2.9G bases, 1.4Gb downloads

UUID: 6871f35a-f3eb-4331-9d0a-db03099e542c

Design: Illumina sequencing of Staphylococcus aureus VET0193R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228584 • SRP042891 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0193R

SAMN02404076 • SRS627000 • All experiments • All runs

Organism: Staphylococcus aureus VET0193R

Library:

Name: Pond-318708

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471469.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLEC

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55310

research_project: RP-513

root_sample_id: SM-4Q5NL

sample_id: SM-5CLEC

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 14.4M spots, 2.9G bases, 1.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR1330214	3,590,215	725.2M	353.6Mb	2014-06-03
SRR1330218	3,589,412	725.1M	351.2Mb	2014-06-03
SRR1330230	3,563,519	719.8M	347.7Mb	2014-06-03
SRR1330247	3,624,492	732.1M	352.9Mb	2014-06-03

ID:: 810663

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