Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX566055: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318276' containing sample 'VET0184R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6M spots, 1.2G bases, 594.8Mb downloads

UUID: c8e435fc-86d5-4ea8-8d99-90ee26df5509

Design: Illumina sequencing of Staphylococcus aureus VET0184R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228576 • SRP042672 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0184R

SAMN02404068 • SRS626311 • All experiments • All runs

Organism: Staphylococcus aureus VET0184R

Library:

Name: Pond-318276

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 469909.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8N4

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55105

research_project: RP-513

root_sample_id: SM-4P94J

sample_id: SM-5C8N4

work_request: 39365

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6M spots, 1.2G bases, 594.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326935	2,931,681	592.2M	291.7Mb	2014-06-03
SRR1344692	3,018,987	609.8M	303.1Mb	2014-06-06

ID:: 808872

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