Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567875: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318296' containing sample 'VET0103R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.3M spots, 1.1G bases, 527.8Mb downloads

UUID: 56c8c663-a828-4f01-9e67-6f2adbca9668

Design: Illumina sequencing of Staphylococcus aureus VET0103R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228524 • SRP042917 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0103R

SAMN02404017 • SRS627028 • All experiments • All runs

Organism: Staphylococcus aureus VET0103R

Library:

Name: Pond-318296

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 469929.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8O8

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55059

research_project: RP-513

root_sample_id: SM-4P933

sample_id: SM-5C8O8

work_request: 39365

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.3M spots, 1.1G bases, 527.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1330258	2,704,674	546.3M	269.1Mb	2014-06-04
SRR1330395	2,623,081	529.9M	258.7Mb	2014-06-04

ID:: 810692

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