Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX548555: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311273' containing sample 'GD2010-168'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.2M spots, 643M bases, 305.4Mb downloads

UUID: d438a935-7f42-4359-8db0-852faf08cbc1

Design: Illumina sequencing of Staphylococcus aureus GD2010-168 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus GD2010-168

SAMN02391364 • SRS616383 • All experiments • All runs

Organism: Staphylococcus aureus GD2010-168

Library:

Name: Pond-311273

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445686.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571UA

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51709

research_project: RP-513

root_sample_id: SM-4PAJL

sample_id: SM-571UA

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.2M spots, 643M bases, 305.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293659	3,183,371	643M	305.4Mb	2014-05-21

ID:: 785513

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