Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555858: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315246' containing sample 'C1846'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.6M spots, 521.9M bases, 305.9Mb downloads

UUID: cb308785-3fd6-4f04-8117-15e2d7831a90

Design: Illumina sequencing of Staphylococcus aureus C1846 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226416 • SRP042550 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus C1846

SAMN02391290 • SRS622940 • All experiments • All runs

Organism: Staphylococcus aureus C1846

Library:

Name: Pond-315246

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445757.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571WB

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51809

research_project: RP-513

root_sample_id: SM-4Q7FD

sample_id: SM-571WB

work_request: 39112

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.6M spots, 521.9M bases, 305.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303553	2,583,505	521.9M	305.9Mb	2014-05-30

ID:: 794886

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