Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX375587: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281325' containing sample 'Staphylococcus aureus M1195'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 458.2Mb downloads

UUID: 20ebd1b4-5f71-4a78-8d4c-07f1b273e4a0

Design: Illumina sequencing of Staphylococcus aureus M1195 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA220052 • SRP032901 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1195

SAMN02360859 • SRS501293 • All experiments • All runs

Organism: Staphylococcus aureus M1195

Library:

Name: Pond-281325

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407733.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WBHO

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48542

research_project: RP-433

root_sample_id: SM-4CVVF

sample_id: SM-4WBHO

work_request: 38311

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-04 13:06:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 458.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1028123	2,520,168	509.1M	224.4Mb	2013-11-11
SRR1043859	2,596,893	524.6M	233.8Mb	2013-12-05

ID:: 537483

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