Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX375514: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281253' containing sample 'Staphylococcus aureus M1108'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.7M spots, 941.8M bases, 414.4Mb downloads

UUID: aaebf018-2b24-4b6d-b0db-879872139480

Design: Illumina sequencing of Staphylococcus aureus M1108 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA219976 • SRP032837 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1108

SAMN02360783 • SRS500750 • All experiments • All runs

Organism: Staphylococcus aureus M1108

Library:

Name: Pond-281253

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407660.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WBFL

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48480

research_project: RP-433

root_sample_id: SM-4CVT9

sample_id: SM-4WBFL

work_request: 38311

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-04 13:06:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.7M spots, 941.8M bases, 414.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1028021	2,373,066	479.4M	212Mb	2013-11-11
SRR1028022	2,289,528	462.5M	202.4Mb	2013-11-11

ID:: 537410

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