Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX375513: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281242' containing sample 'Staphylococcus aureus M1107'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 964.9M bases, 422.1Mb downloads

UUID: 14365805-791a-4940-a7a5-7404667d9c56

Design: Illumina sequencing of Staphylococcus aureus M1107 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA219975 • SRP032836 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1107

SAMN02360782 • SRS500749 • All experiments • All runs

Organism: Staphylococcus aureus M1107

Library:

Name: Pond-281242

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407649.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WBFA

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48479

research_project: RP-433

root_sample_id: SM-4CVT8

sample_id: SM-4WBFA

work_request: 38311

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-04 13:06:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.8M spots, 964.9M bases, 422.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1028019	2,433,914	491.7M	216.2Mb	2013-11-11
SRR1028020	2,342,846	473.3M	205.8Mb	2013-11-11

ID:: 537409

SRA

Sequence Read Archive

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