Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX368174: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279941' containing sample 'Staphylococcus aureus M1469'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.1M spots, 825.6M bases, 370.7Mb downloads

UUID: e5bccce8-739d-47f4-bd90-ba978798c899

Design: Illumina sequencing of Staphylococcus aureus M1469 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218452 • SRP032156 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1469

SAMN02350631 • SRS494215 • All experiments • All runs

Organism: Staphylococcus aureus M1469

Library:

Name: Pond-279941

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402393.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJO7

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47915

research_project: RP-433

root_sample_id: SM-4CWAG

sample_id: SM-4VJO7

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.1M spots, 825.6M bases, 370.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017471	2,040,499	412.2M	184.8Mb	2013-10-25
SRR1017472	2,046,865	413.5M	185.9Mb	2013-10-25

ID:: 526805

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity