Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX368108: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279953' containing sample 'Staphylococcus aureus M1400'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 874.4M bases, 416.1Mb downloads

UUID: 80bbc8c7-16c3-4aed-8594-7702a06edd55

Design: Illumina sequencing of Staphylococcus aureus M1400 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218395 • SRP032099 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1400

SAMN02350575 • SRS494150 • All experiments • All runs

Organism: Staphylococcus aureus M1400

Library:

Name: Pond-279953

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402405.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJOJ

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47859

research_project: RP-433

root_sample_id: SM-4CW8P

sample_id: SM-4VJOJ

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 874.4M bases, 416.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017354	2,162,413	436.8M	208.1Mb	2013-10-25
SRR1017355	2,166,163	437.6M	208Mb	2013-10-25

ID:: 526739

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Sequence Read Archive

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