Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX364542: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278592' containing sample 'Staphylococcus aureus M1006'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 768.2M bases, 365.7Mb downloads

UUID: 5fcebdc1-686d-4c4e-9c43-48e8ccbdb86e

Design: Illumina sequencing of Staphylococcus aureus M1006 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA217110 • SRP031387 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1006

SAMN02334634 • SRS490959 • All experiments • All runs

Organism: Staphylococcus aureus M1006

Library:

Name: Pond-278592

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396164.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWL9

material_type: DNA:DNA Somatic

product_order: PDO-1932

product_part_number: P-WG-0004

project: G46173

research_project: RP-433

root_sample_id: SM-4C5EZ

sample_id: SM-4UWL9

work_request: 37965

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 03:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 768.2M bases, 365.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1012137	1,903,219	384.5M	183.2Mb	2013-10-16
SRR1012138	1,899,536	383.7M	182.5Mb	2013-10-16

ID:: 521360

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