Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX364540: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278570' containing sample 'Staphylococcus aureus M1002'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.2M spots, 1.1G bases, 497.1Mb downloads

UUID: 60ade27c-3a18-4554-b5cf-4f6523c2e8b0

Design: Illumina sequencing of Staphylococcus aureus M1002 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA217108 • SRP031385 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1002

SAMN02334632 • SRS490957 • All experiments • All runs

Organism: Staphylococcus aureus M1002

Library:

Name: Pond-278570

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396142.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWKM

material_type: DNA:DNA Somatic

product_order: PDO-1932

product_part_number: P-WG-0004

project: G46171

research_project: RP-433

root_sample_id: SM-4C5EX

sample_id: SM-4UWKM

work_request: 37965

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 03:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.2M spots, 1.1G bases, 497.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1012133	2,610,423	527.3M	248.2Mb	2013-10-16
SRR1012134	2,613,659	528M	248.9Mb	2013-10-16

ID:: 521358

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