Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX363598: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278015' containing sample 'Staphylococcus aureus M0869'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.1M spots, 825.3M bases, 402.7Mb downloads

UUID: 6661fdf8-472f-4cd6-9d6c-3a1614d74a00

Design: Illumina sequencing of Staphylococcus aureus M0869 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216819 • SRP030873 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0869

SAMN02325770 • SRS490228 • All experiments • All runs

Organism: Staphylococcus aureus M0869

Library:

Name: Pond-278015

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394161.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T8A1

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46074

research_project: RP-433

root_sample_id: SM-4C9LB

sample_id: SM-4T8A1

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.1M spots, 825.3M bases, 402.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010669	2,067,195	417.6M	203.5Mb	2013-10-09
SRR1010670	2,018,511	407.7M	199.2Mb	2013-10-09

ID:: 516035

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