Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX367923: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279392' containing sample 'Staphylococcus aureus M0788'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.1M spots, 827M bases, 353.8Mb downloads

UUID: 30aa7fc8-f262-4ee1-bce4-07309e2fa849

Design: Illumina sequencing of Staphylococcus aureus M0788 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216752 • SRP031932 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0788

SAMN02325703 • SRS493972 • All experiments • All runs

Organism: Staphylococcus aureus M0788

Library:

Name: Pond-279392

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396275.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWOF

material_type: DNA:DNA Somatic

product_order: PDO-1837

product_part_number: P-WG-0004

project: G45294

research_project: RP-433

root_sample_id: SM-4CXEL

sample_id: SM-4UWOF

work_request: 37670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-11 17:00:05.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.1M spots, 827M bases, 353.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017059	2,049,560	414M	176.7Mb	2013-10-25
SRR1017060	2,044,691	413M	177.1Mb	2013-10-25

ID:: 526554

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