Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX367919: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279378' containing sample 'Staphylococcus aureus M0783'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.2M spots, 1.1G bases, 449.6Mb downloads

UUID: e9b53f33-caa5-4027-80ec-ffe0054cb671

Design: Illumina sequencing of Staphylococcus aureus M0783 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216748 • SRP031928 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0783

SAMN02325699 • SRS493968 • All experiments • All runs

Organism: Staphylococcus aureus M0783

Library:

Name: Pond-279378

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396261.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWO1

material_type: DNA:DNA Somatic

product_order: PDO-1837

product_part_number: P-WG-0004

project: G45290

research_project: RP-433

root_sample_id: SM-4CXEG

sample_id: SM-4UWO1

work_request: 37670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-11 17:00:05.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.2M spots, 1.1G bases, 449.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1016963	2,623,238	529.9M	224.2Mb	2013-10-25
SRR1016964	2,624,864	530.2M	225.5Mb	2013-10-25

ID:: 526550

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity