Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX364369: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275848' containing sample 'Staphylococcus aureus M0442'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.4M spots, 681M bases, 282.5Mb downloads

UUID: d14f4a02-395f-4a69-954e-ffca7a27244f

Design: Illumina sequencing of Staphylococcus aureus M0442 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216465 • SRP031217 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0442

SAMN02325419 • SRS490788 • All experiments • All runs

Organism: Staphylococcus aureus M0442

Library:

Name: Pond-275848

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 386031.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJT9

material_type: DNA:DNA Somatic

product_order: PDO-1799

product_part_number: P-WG-0004

project: G45012

research_project: RP-433

root_sample_id: SM-4CYJE

sample_id: SM-4RJT9

work_request: 37548

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-10 22:09:59.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.4M spots, 681M bases, 282.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011881	1,694,786	342.3M	141.5Mb	2013-10-16
SRR1011882	1,676,675	338.7M	141Mb	2013-10-16

ID:: 521187

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