Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX364230: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275268' containing sample 'Staphylococcus aureus M0259'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 777.5M bases, 365.2Mb downloads

UUID: cef3d42e-64df-466c-8782-a9c23eff05c8

Design: Illumina sequencing of Staphylococcus aureus M0259 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216339 • SRP031077 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0259

SAMN02325294 • SRS490648 • All experiments • All runs

Organism: Staphylococcus aureus M0259

Library:

Name: Pond-275268

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385950.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJQX

material_type: DNA:DNA Somatic

product_order: PDO-1798

product_part_number: P-WG-0004

project: G44715

research_project: RP-433

root_sample_id: SM-4CUKO

sample_id: SM-4RJQX

work_request: 37547

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-04 02:35:40.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 2 runs, 3.8M spots, 777.5M bases, 365.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011601	1,952,602	394.4M	186.1Mb	2013-10-16
SRR1011602	1,896,451	383.1M	179.1Mb	2013-10-16

ID:: 521043

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