Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX359245: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-271591' containing sample 'Staphylococcus aureus M0138'
2 ILLUMINA (Illumina HiSeq 2000) runs: 8.4M spots, 1.7G bases, 758.1Mb downloads

UUID: 1892ab55-22db-4e17-bd3b-77f8eb7adf75

Design: Illumina sequencing of Staphylococcus aureus M0138 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216256 • SRP030323 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0138

SAMN02325211 • SRS486906 • All experiments • All runs

Organism: Staphylococcus aureus M0138

Library:

Name: Pond-271591

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 384992.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHIZ

material_type: DNA:DNA Somatic

product_order: PDO-1797

product_part_number: P-WG-0004

project: G44546

research_project: RP-433

root_sample_id: SM-4C5C5

sample_id: SM-4RHIZ

work_request: 37546

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-16 20:54:12.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 8.4M spots, 1.7G bases, 758.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001688	4,232,594	855M	380.2Mb	2013-09-24
SRR1001689	4,200,794	848.6M	377.9Mb	2013-09-24

ID:: 507546

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