Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX359233: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-271633' containing sample 'Staphylococcus aureus M0124'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 976.3M bases, 442.6Mb downloads

UUID: fa941850-f7c3-487a-81b8-b65d94e1aa11

Design: Illumina sequencing of Staphylococcus aureus M0124 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216244 • SRP030311 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0124

SAMN02325199 • SRS486894 • All experiments • All runs

Organism: Staphylococcus aureus M0124

Library:

Name: Pond-271633

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385034.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHK7

material_type: DNA:DNA Somatic

product_order: PDO-1797

product_part_number: P-WG-0004

project: G44534

research_project: RP-433

root_sample_id: SM-4C5BR

sample_id: SM-4RHK7

work_request: 37546

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-16 20:54:12.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.8M spots, 976.3M bases, 442.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001664	2,405,490	485.9M	220.4Mb	2013-09-24
SRR1001665	2,427,744	490.4M	222.2Mb	2013-09-24

ID:: 507534

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