Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX359223: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-273453' containing sample 'Staphylococcus aureus M0112'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.9M spots, 1.2G bases, 571.9Mb downloads

UUID: 63324c12-2fe3-46fe-9418-1a7149d1e7f1

Design: Illumina sequencing of Staphylococcus aureus M0112 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216234 • SRP030301 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0112

SAMN02325189 • SRS486884 • All experiments • All runs

Organism: Staphylococcus aureus M0112

Library:

Name: Pond-273453

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385223.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHFV

material_type: DNA:DNA Somatic

product_order: PDO-1796

product_part_number: P-WG-0004

project: G44954

research_project: RP-433

root_sample_id: SM-4CY6K

sample_id: SM-4RHFV

work_request: 37545

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-17 15:33:01.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.9M spots, 1.2G bases, 571.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001644	2,968,863	599.7M	289.3Mb	2013-09-24
SRR1001645	2,908,555	587.5M	282.5Mb	2013-09-24

ID:: 507524

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Sequence Read Archive

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