RNA-seq of Cornus florida Cherokee Brave isolate D49 at infection tim... - SRA

Links from BioProject

SRX7265078: RNA-seq of Cornus florida Cherokee Brave isolate D49 at infection time point 9
1 ILLUMINA (NextSeq 500) run: 12.2M spots, 1.8G bases, 778.6Mb downloads

Design: Using a modified Zymo Direct-zol RNA protocol (Cat#: R2052) RNA was isolated from flowering dogwood (Cornus florida) leaves which were inoculated with powdery mildew (Erysiphe pulchra) followed by clean-up using Zymo Clean and concentrator kit (Cat#: R1017). Following isolation, RNA-seq libraries were prepared using the KAPA Stranded mRNA-Seq kit (library selection: poly-A). Sequences were generated at the University of Georgia's Georgia Genomics and Bioinformatics Core (GGBC) on the Illumina NextSeq500 sequencing platform.

Submitted by: University of Georgia

Study: Cornus florida cultivar:'Appalachian Spring' Transcriptome or Gene expression

PRJNA387205 • SRP234292 • All experiments • All runs

show Abstracthide Abstract

A high quality reference genome sequence and annotation for dogwoods and the Cornales

Sample:

SAMN13480996 • SRS5759917 • All experiments • All runs

Organism: Cornus florida

Library:

Name: CorFlo_CheBra_D49_T9

Instrument: NextSeq 500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PolyA

Layout: PAIRED

Runs: 1 run, 12.2M spots, 1.8G bases, 778.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR10584703	12,173,564	1.8G	778.6Mb	2019-12-06

ID:: 9539579

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity