Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX555667: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319971' containing sample 'VET1949S'
1 ILLUMINA (Illumina HiSeq 2000) run: 6.1M spots, 1.2G bases, 574.9Mb downloads

UUID: 94a70c11-9028-47ed-a335-e5143372e950

Design: Illumina sequencing of Staphylococcus aureus VET1949S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228902 • SRP042427 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1949S

SAMN02404392 • SRS622757 • All experiments • All runs

Organism: Staphylococcus aureus VET1949S

Library:

Name: Pond-319971

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 473561.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CVKK

material_type: DNA:DNA Somatic

product_order: PDO-2556

product_part_number: P-WG-0004

project: G55008

research_project: RP-513

root_sample_id: SM-4Q55S

sample_id: SM-5CVKK

work_request: 39345

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 6.1M spots, 1.2G bases, 574.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303267	6,107,505	1.2G	574.9Mb	2014-05-29

ID:: 794677

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity