Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX566101: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319796' containing sample 'VET1052S'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.6M spots, 1.1G bases, 510.8Mb downloads

UUID: 0c767562-26db-49e3-99c6-29ef57b74c00

Design: Illumina sequencing of Staphylococcus aureus VET1052S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228867 • SRP042715 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1052S

SAMN02404357 • SRS626357 • All experiments • All runs

Organism: Staphylococcus aureus VET1052S

Library:

Name: Pond-319796

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470850.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDI5

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55273

research_project: RP-513

root_sample_id: SM-4Q54S

sample_id: SM-5CDI5

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.6M spots, 1.1G bases, 510.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326990	2,753,913	556.3M	253Mb	2014-06-03
SRR1340415	2,814,177	568.5M	257.8Mb	2014-06-05

ID:: 808918

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