Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX567884: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318729' containing sample 'VET0303R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 12.8M spots, 2.6G bases, 1.3Gb downloads

UUID: f129f543-305f-46a4-ba97-d72908413677

Design: Illumina sequencing of Staphylococcus aureus VET0303R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228661 • SRP042926 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0303R

SAMN02404153 • SRS627037 • All experiments • All runs

Organism: Staphylococcus aureus VET0303R

Library:

Name: Pond-318729

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471490.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLEX

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55383

research_project: RP-513

root_sample_id: SM-4Q5PT

sample_id: SM-5CLEX

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 12.8M spots, 2.6G bases, 1.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR1330278	3,197,873	646M	326Mb	2014-06-04
SRR1330356	3,203,198	647M	324.4Mb	2014-06-04
SRR1330413	3,233,014	653.1M	326.2Mb	2014-06-04
SRR1330416	3,173,334	641M	320.6Mb	2014-06-04

ID:: 810701

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